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Biology
Posted 7 months ago
Suppose you performed a Sanger sequencing reaction using a radioactive primer on the template shown below. Draw the expected result. A a P a B 5' \square OH 8 a 3' \square - TTTCCCAAAGGG = \} mu DNA polymerase + dNTP + ddATP / ddCTP/ ddGTP / ddTTP Autoradiogram of single - stranded DNA Radioactively labeled electrophoresis C D dd I 7 |
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Answer from Sia
Posted 7 months ago
Answer
The expected result is a series of bands on the autoradiogram, each corresponding to different lengths of DNA fragments terminated by ddNTPs.
Solution
a
Template DNA: The given template DNA sequence is 5'-TTTCCCAAAGGG-3'
b
Primer Annealing: A radioactive primer will anneal to the 3' end of the template DNA
c
DNA Polymerization: DNA polymerase will extend the primer by adding dNTPs complementary to the template until a ddNTP is incorporated, which terminates the extension
d
ddNTP Incorporation: The ddNTPs (ddATP, ddCTP, ddGTP, ddTTP) lack a 3' hydroxyl group, preventing further extension once incorporated
e
Expected Fragments: The fragments generated will be: - 5'-ddA - 5'-ddCA - 5'-ddGCA - 5'-ddTGCA - 5'-ddATGCA - 5'-ddAATGCA - 5'-ddGAATGCA - 5'-ddCGAATGCA - 5'-ddCCGAATGCA - 5'-ddACCGAATGCA - 5'-ddAACCGAATGCA - 5'-ddGAACCGAATGCA
f
Autoradiogram: The autoradiogram will show bands corresponding to the length of each terminated fragment, with the shortest fragment closest to the well and the longest fragment furthest from the well
Key Concept
Sanger sequencing is a method of DNA sequencing based on selective incorporation of chain-terminating dideoxynucleotides by DNA polymerase during in vitro DNA replication.
Explanation
In Sanger sequencing, the incorporation of a specific ddNTP terminates the DNA strand extension, resulting in fragments of varying lengths that can be separated by electrophoresis to determine the DNA sequence.

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